A man confronts his past during an experiment that attempts to find a solution to the problems of a post-apocalyptic world caused by a world war.
The TARDIS materialises not far from Paris in 1794 — one of the bloodiest years following the French Revolution of 1789. The travellers become involved with an escape chain rescuing prisoners from the guillotine and get caught up in the machinations of an English undercover spy, James Stirling — alias Lemaitre, governor of the Conciergerie prison.
When the TARDIS malfunctions, it and its travellers land on Earth at the size of insects. They uncover a murderous plot involving a new insecticide, but how can they stop the crime in their miniaturised condition?
The TARDIS arrives in a desolate future London, where the Doctor discovers his old enemies the Daleks have taken control of Earth.
The drug-induced utopias of four Coney Island residents are shattered when their addictions run deep.
The TARDIS arrives on the planet Marinus on an island of glass surrounded by a sea of acid. The travellers are forced by the elderly Arbitan to retrieve four of the five operating keys to a machine called the Conscience of Marinus, of which he is the keeper. These have been hidden in different locations around the planet to prevent them falling into the hands of the evil Yartek and his Voord warriors, who plan to seize the machine and use its originally benevolent mind-influencing power for their own sinister purposes.
The Doctor is summoned by the mysterious and powerful White Guardian, and sent on a quest to find the six segments of the Key to Time, which, once assembled, will restore balance to the Universe. Joining the Doctor and K9 is the smart and sassy Romana, a Time Lord fresh from the Academy. Landing on the wintry planet of Ribos to locate the first segment, the TARDIS crew quickly find themselves embroiled in a little local trouble with a pair of conmen and an unstable warlord...
The Doctor returns to Peladon fifty years after his last visit, to find Queen Thalira, daughter of the late King Peladon, on the throne. A tense labour dispute between Pel nobility and miners is worsened when apparitions of their deity Aggedor attack and kill several miners. The Galactic Federation desperately needs trisilicate for its war against Galaxy 5 and sends in brutal Ice Warrior troopers to ensure production. The Doctor discovers a devious plot at the heart of Aggedor's appearances.
The story revolves around the lost planet Shada, on which the Time Lords built a prison for defeated would-be conquerors of the universe. Skagra, one such inmate, needs the help of one of the prison's inmates. He finds nobody knows where Shada is anymore except one aged Time Lord who has retired to Earth, where he is a professor at St. Cedd's College, Cambridge. Luckily for the universe, Skagra's attempt to force the information out of Professor Chronotis coincides with a visit by the professor's old friend, the Doctor. (Filming for this story was never finished, and in this version the story is completed via on-camera narration.)
An alien intelligence hitches a ride onboard the TARDIS to 15th century Italy, where a deranged astrologer attempts to harness its power.
The Doctor arrives on a planet where two tribes, the savage Sevateem and the technically brilliant Tesh, are at war. He meets Leela, an exile from the Sevateem, and discovers that the tribes' god of evil is apparently himself...
Charged with genocide by the treacherous Valeyard at his trial, the Doctor receives help from an unlikely source to turn the tide of the High Council's rulings in his favour and reveal the Valeyard as a wrongdoer: the Master. For the Valeyard's own crimes are so atrocious, even the Doctor's archenemy will help him to ensure that the villain won't see the light of day again. Cornered, the Valeyard flees to the Matrix, where he can be the Doctor's judge, jury and executioner...
As evidence for the defense at his ongoing trial, the Doctor presents an adventure from his future when he is travelling with a computer programmer named Mel. Answering a mysterious distress call from the space liner Hyperion III, they find that the passengers aboard include unscrupulous scientists, secret agents, saboteurs, thieves and a murderer. And lurking in the shadows are the Vervoids, the product of sinister botanical experiments, who will stop at nothing to destroy all non-plant life.
As the Doctor's trial continues, evidence is presented showing his most recent adventure, one where he faces an old adversary, Sil. As a scientist conducts his unethical experiments to prolong the life of Sil's boss Kiv, the Doctor's memories of the events begins to return and an unpleasant surprise awaits him.
The Doctor is summoned before the High Council of Time Lords to stand trial for the charges of harmful interference to the course of events during his travels which have threatened the sanctity of the universe. Indignant at these accusations, the Doctor pleads his case to the Inquisitor with the hope that she will see him as a source of hope and goodwill for existence. However, his prosecuting attorney, a sinister Time Lord known simply as the Valeyard, begins a crusade against the Doctor with the motive of framing him as a villainous renegade.
A race of giant Gastropods has taken over the planet Jaconda. Their leader, Mestor, now intends to cause an enormous explosion in order to spread his people's eggs throughout the galaxy, and he kidnaps juvenile twin geniuses from Earth to work out the necessary mathematical equations. Space fighters led by Lieutenant Hugo Lang are dispatched to get the twins back, but they come under attack and Lang is the sole survivor when his ship crashes on the asteroid Titan III. A newly regenerated Doctor and Peri become involved and help Jaconda's elderly former ruler Professor Edgeworth, who is really a Time Lord named Azmael, to defeat Mestor and free the planet's bird-like indigenous people from the gastropods' reign of terror. Azmael, however, sacrifices his life in the process.
The Doctor and Peri arrive on Karfel, a planet ruled by fear where the enemies of its ruler, the despotic Borad, are banished into a time tunnel known as the Timelash.
Suddenly gripped by a memory of being executed in his second incarnation, the Sixth Doctor travels to Seville to save his past self and ensure his own existence in his present.
The Doctor discovers his old enemy the Master is intent on preventing Earth's industrial revolution in 19th century England. But the Rani, a second rogue Time Lord, has plans of her own...
An alien distress call draws the Doctor and Peri to Earth, 1985, where they uncover a Cyberman plot to change the course of history.